Basic Information
Locus ID:
Lb1G04113
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 326956245 | 326959289 | + | Lb1G04113 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 95,100.53 Da | 39.35 | 85.58 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12087 | TM_EGFR-like | 417 | 448 | 6.47978E-7 | - |
| CDD | cd14066 | STKc_IRAK | 526 | 800 | 7.85592E-97 | - |
| CDD | cd12087 | TM_EGFR-like | 417 | 448 | 6.47978E-7 | - |
| CDD | cd14066 | STKc_IRAK | 526 | 800 | 7.85592E-97 | - |
| Pfam | PF00069 | Protein kinase domain | 520 | 795 | 1.5E-46 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 51 | 91 | 2.0E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 315 | 368 | 5.1E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 520 | 795 | 1.5E-46 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 315 | 368 | 5.1E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 51 | 91 | 2.0E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 499 | 797 | 1.45E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 19 | 368 | 1.22E-41 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 19 | 368 | 1.22E-41 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 499 | 797 | 1.45E-78 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 274 | 387 | 2.4E-28 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 598 | 820 | 7.0E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 5 | 272 | 1.8E-61 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 598 | 820 | 7.0E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 483 | 597 | 4.8E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 483 | 597 | 4.8E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 5 | 272 | 1.8E-61 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 274 | 387 | 2.4E-28 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 229 | 252 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 55 | 78 | 0.0034 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 337 | 361 | 8.7 | IPR003591 |
| SMART | SM00220 | serkin_6 | 520 | 805 | 3.3E-42 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 337 | 361 | 8.7 | IPR003591 |
| SMART | SM00220 | serkin_6 | 520 | 805 | 3.3E-42 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 130 | 153 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 229 | 252 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 55 | 78 | 0.0034 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 130 | 153 | 200.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 339 | 361 | 7.203709 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 520 | 800 | 39.142006 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 57 | 78 | 7.357723 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 339 | 361 | 7.203709 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 57 | 78 | 7.357723 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 520 | 800 | 39.142006 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 526 | 548 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 645 | 657 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 645 | 657 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 526 | 548 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 375 | 412 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 841 | 879 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 841 | 879 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 375 | 412 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01820.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021847754.1 | receptor protein kinase TMK1-like [Spinacia oleracea] | 0 |
| Q9SIT1 | Receptor-like kinase TMK3 OS=Arabidopsis thaliana OX=3702 GN=TMK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9FAG2 | Receptor protein serine/threonine kinase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology