Basic Information
Locus ID:
Lb1G03963
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 321801515 | 321804040 | - | Lb1G03963 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 68,972.97 Da | 42.83 | 88.44 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 545 | 586 | 9.32405E-22 | - |
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 545 | 586 | 9.32405E-22 | - |
| Pfam | PF04564 | U-box domain | 541 | 610 | 1.0E-16 | IPR003613 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 285 | 351 | 1.1E-7 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 359 | 512 | 4.7E-10 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 285 | 351 | 1.1E-7 | IPR001245 |
| Pfam | PF04564 | U-box domain | 541 | 610 | 1.0E-16 | IPR003613 |
| Pfam | PF00069 | Protein kinase domain | 359 | 512 | 4.7E-10 | IPR000719 |
| SUPERFAMILY | SSF57850 | RING/U-box | 540 | 610 | 6.62E-24 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 266 | 512 | 2.89E-37 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 540 | 610 | 6.62E-24 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 266 | 512 | 2.89E-37 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 253 | 350 | 1.9E-19 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 253 | 350 | 1.9E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 351 | 537 | 5.4E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 351 | 537 | 5.4E-26 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 540 | 611 | 5.1E-27 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 540 | 611 | 5.1E-27 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 544 | 607 | 6.1E-25 | IPR003613 |
| SMART | SM00504 | Ubox_2 | 544 | 607 | 6.1E-25 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 540 | 611 | 29.811775 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 540 | 611 | 29.811775 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 283 | 527 | 18.068213 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 283 | 527 | 18.068213 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 289 | 310 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 289 | 310 | - | IPR017441 |
| Coils | Coil | Coil | 79 | 99 | - | - |
| Coils | Coil | Coil | 79 | 99 | - | - |
| Coils | Coil | Coil | 158 | 199 | - | - |
| Coils | Coil | Coil | 158 | 199 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49060.3 | - | 0 |
| RefSeq | XP_021765090.1 | U-box domain-containing protein 32-like isoform X4 [Chenopodium quinoa] | 0 |
| Q94A51 | U-box domain-containing protein 32 OS=Arabidopsis thaliana OX=3702 GN=PUB32 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B6Z697 | Putative U-box domain-containing protein 32 isoform X1 OS=Davidia involucrata OX=16924 GN=Din_009046 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology