Basic Information
Locus ID:
Lb1G03807
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Translocase of chloroplast 90
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 317493662 | 317498259 | + | Lb1G03807 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 92,465.17 Da | 48.42 | 86.91 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04548 | AIG1 family | 201 | 359 | 5.6E-24 | IPR006703 |
| Pfam | PF04548 | AIG1 family | 201 | 359 | 5.6E-24 | IPR006703 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 553 | 818 | 2.4E-98 | IPR024283 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 553 | 818 | 2.4E-98 | IPR024283 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 194 | 354 | 4.73E-18 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 194 | 354 | 4.73E-18 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 173 | 424 | 9.8E-53 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 173 | 424 | 9.8E-53 | IPR027417 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 197 | 427 | 28.329231 | IPR006703 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 197 | 427 | 28.329231 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 527 | 546 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 527 | 546 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 527 | 542 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 527 | 542 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20300.1 | Avirulence induced gene (AIG1) family protein. | 0 |
| RefSeq | XP_022729502.1 | translocase of chloroplast 90, chloroplastic-like [Durio zibethinus] | 0 |
| Q6S5G3 | Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC90 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P5XNL2 | translocase of chloroplast 90, chloroplastic-like OS=Durio zibethinus OX=66656 GN=LOC111284806 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology