Basic Information
Locus ID:
Lb1G03740
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Random slug protein 5-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 316068041 | 316070265 | + | Lb1G03740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 31,914.56 Da | 49.36 | 68.09 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00170 | SEC14 | 91 | 241 | 7.8408E-38 | IPR001251 |
| CDD | cd00170 | SEC14 | 91 | 241 | 7.8408E-38 | IPR001251 |
| Pfam | PF00650 | CRAL/TRIO domain | 89 | 241 | 1.5E-32 | IPR001251 |
| Pfam | PF03765 | CRAL/TRIO, N-terminal domain | 44 | 68 | 8.8E-8 | IPR011074 |
| Pfam | PF03765 | CRAL/TRIO, N-terminal domain | 44 | 68 | 8.8E-8 | IPR011074 |
| Pfam | PF00650 | CRAL/TRIO domain | 89 | 241 | 1.5E-32 | IPR001251 |
| SUPERFAMILY | SSF52087 | CRAL/TRIO domain | 83 | 261 | 1.15E-47 | IPR036865 |
| SUPERFAMILY | SSF52087 | CRAL/TRIO domain | 83 | 261 | 1.15E-47 | IPR036865 |
| SUPERFAMILY | SSF46938 | CRAL/TRIO N-terminal domain | 12 | 85 | 1.44E-19 | IPR036273 |
| SUPERFAMILY | SSF46938 | CRAL/TRIO N-terminal domain | 12 | 85 | 1.44E-19 | IPR036273 |
| Gene3D | G3DSA:3.40.525.10 | - | 3 | 277 | 1.6E-77 | IPR036865 |
| Gene3D | G3DSA:3.40.525.10 | - | 3 | 277 | 1.6E-77 | IPR036865 |
| SMART | SM00516 | sec14_4 | 89 | 243 | 3.8E-43 | IPR001251 |
| SMART | SM01100 | CRAL_TRIO_N_2 | 44 | 69 | 6.4E-7 | IPR011074 |
| SMART | SM01100 | CRAL_TRIO_N_2 | 44 | 69 | 6.4E-7 | IPR011074 |
| SMART | SM00516 | sec14_4 | 89 | 243 | 3.8E-43 | IPR001251 |
| ProSiteProfiles | PS50191 | CRAL-TRIO lipid binding domain profile. | 83 | 246 | 17.412994 | IPR001251 |
| ProSiteProfiles | PS50191 | CRAL-TRIO lipid binding domain profile. | 83 | 246 | 17.412994 | IPR001251 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G22180.2 | Sec14p-like phosphatidylinositol transfer family protein. | 0 |
| RefSeq | XP_050211978.1 | uncharacterized protein LOC126662128 isoform X2 [Mercurialis annua] | 0 |
| Q9UU99 | CRAL-TRIO domain-containing protein C23B6.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC23B6.04c PE=1 SV=1 | 0 | |
| TrEMBL | A0A8J5Z5A0 | CRAL-TRIO domain-containing protein OS=Gossypium anomalum OX=47600 GN=CXB51_015112 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology