Basic Information
Locus ID:
Lb1G03590
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 311789232 | 311794806 | + | Lb1G03590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.31 | 62,704.21 Da | 48.21 | 74.11 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 147 | 229 | 6.26223E-14 | - |
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 147 | 229 | 6.26223E-14 | - |
| Pfam | PF00651 | BTB/POZ domain | 142 | 244 | 2.2E-15 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 269 | 361 | 2.4E-8 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 142 | 244 | 2.2E-15 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 269 | 361 | 2.4E-8 | IPR011705 |
| SUPERFAMILY | SSF54695 | POZ domain | 147 | 243 | 6.67E-13 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 447 | 558 | 1.08E-5 | - |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 447 | 558 | 1.08E-5 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 147 | 243 | 6.67E-13 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 137 | 266 | 8.2E-19 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 277 | 384 | 3.4E-12 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 137 | 266 | 8.2E-19 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 277 | 384 | 3.4E-12 | - |
| SMART | SM00875 | BACK_2 | 261 | 363 | 4.4E-9 | IPR011705 |
| SMART | SM00225 | BTB_4 | 146 | 246 | 5.8E-11 | IPR000210 |
| SMART | SM00225 | BTB_4 | 146 | 246 | 5.8E-11 | IPR000210 |
| SMART | SM00875 | BACK_2 | 261 | 363 | 4.4E-9 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 146 | 215 | 13.239526 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 146 | 215 | 13.239526 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46260.1 | BTB/POZ/Kelch-associated protein. | 0 |
| RefSeq | XP_012437729.1 | BTB/POZ domain-containing protein POB1 [Gossypium raimondii] | 0 |
| O82343 | BTB/POZ domain-containing protein At2g46260 OS=Arabidopsis thaliana OX=3702 GN=At2g46260 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0D2PTN0 | BTB domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_008G122900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology