Basic Information
Locus ID:
Lb1G03004
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
PAS fold
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 291894030 | 291909411 | - | Lb1G03004 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.64 | 83,003.56 Da | 49.23 | 78.90 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 479 | 724 | 3.64666E-123 | - |
| CDD | cd13999 | STKc_MAP3K-like | 479 | 724 | 3.64666E-123 | - |
| CDD | cd00130 | PAS | 134 | 232 | 3.28943E-15 | IPR000014 |
| CDD | cd00130 | PAS | 134 | 232 | 3.28943E-15 | IPR000014 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 473 | 724 | 4.5E-64 | IPR001245 |
| Pfam | PF00989 | PAS fold | 126 | 232 | 2.1E-15 | IPR013767 |
| Pfam | PF00989 | PAS fold | 126 | 232 | 2.1E-15 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 473 | 724 | 4.5E-64 | IPR001245 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 129 | 232 | 4.67E-22 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 460 | 724 | 9.85E-82 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 129 | 232 | 4.67E-22 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 460 | 724 | 9.85E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 553 | 737 | 2.3E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 466 | 550 | 8.9E-30 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 466 | 550 | 8.9E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 553 | 737 | 2.3E-61 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 134 | 241 | 2.4E-25 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 134 | 241 | 2.4E-25 | - |
| SMART | SM00091 | pas_2 | 125 | 191 | 7.6E-11 | IPR000014 |
| SMART | SM00220 | serkin_6 | 473 | 728 | 7.8E-57 | IPR000719 |
| SMART | SM00091 | pas_2 | 125 | 191 | 7.6E-11 | IPR000014 |
| SMART | SM00220 | serkin_6 | 473 | 728 | 7.8E-57 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 125 | 233 | 3.7E-16 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 125 | 233 | 3.7E-16 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 123 | 194 | 17.507275 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 473 | 727 | 42.039474 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 123 | 194 | 17.507275 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 473 | 727 | 42.039474 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 591 | 603 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 591 | 603 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 331 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 331 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 91 | 118 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 91 | 118 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 75 | - | - |
| Coils | Coil | Coil | 731 | 744 | - | - |
| Coils | Coil | Coil | 731 | 744 | - | - |
| Coils | Coil | Coil | 6 | 33 | - | - |
| Coils | Coil | Coil | 6 | 33 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06620.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_018825653.1 | serine/threonine-protein kinase STY8-like isoform X1 [Juglans regia] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2I4F1X5 | serine/threonine-protein kinase STY8-like isoform X1 OS=Juglans regia OX=51240 GN=LOC108994777 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology