Basic Information
Locus ID:
Lb1G02963
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
HSP101
Description:
Belongs to the ClpA ClpB family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 290847031 | 290851633 | - | Lb1G02963 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 101,110.19 Da | 38.43 | 97.71 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 572 | 767 | 3.72844E-21 | - |
| CDD | cd00009 | AAA | 183 | 338 | 2.87369E-22 | - |
| CDD | cd00009 | AAA | 572 | 767 | 3.72844E-21 | - |
| CDD | cd00009 | AAA | 183 | 338 | 2.87369E-22 | - |
| Pfam | PF10431 | C-terminal, D2-small domain, of ClpB protein | 768 | 847 | 8.4E-22 | IPR019489 |
| Pfam | PF10431 | C-terminal, D2-small domain, of ClpB protein | 768 | 847 | 8.4E-22 | IPR019489 |
| Pfam | PF07724 | AAA domain (Cdc48 subfamily) | 598 | 762 | 1.9E-54 | IPR003959 |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 205 | 318 | 1.9E-13 | IPR003959 |
| Pfam | PF02861 | Clp amino terminal domain, pathogenicity island component | 17 | 67 | 3.1E-6 | IPR004176 |
| Pfam | PF02861 | Clp amino terminal domain, pathogenicity island component | 97 | 147 | 7.2E-9 | IPR004176 |
| Pfam | PF07724 | AAA domain (Cdc48 subfamily) | 598 | 762 | 1.9E-54 | IPR003959 |
| Pfam | PF17871 | AAA lid domain | 345 | 444 | 1.9E-34 | IPR041546 |
| Pfam | PF02861 | Clp amino terminal domain, pathogenicity island component | 17 | 67 | 3.1E-6 | IPR004176 |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 205 | 318 | 1.9E-13 | IPR003959 |
| Pfam | PF17871 | AAA lid domain | 345 | 444 | 1.9E-34 | IPR041546 |
| Pfam | PF02861 | Clp amino terminal domain, pathogenicity island component | 97 | 147 | 7.2E-9 | IPR004176 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 161 | 546 | 3.79E-96 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 547 | 848 | 1.07E-81 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 547 | 848 | 1.07E-81 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 161 | 546 | 3.79E-96 | IPR027417 |
| SUPERFAMILY | SSF81923 | Double Clp-N motif | 4 | 158 | 1.83E-25 | IPR036628 |
| SUPERFAMILY | SSF81923 | Double Clp-N motif | 4 | 158 | 1.83E-25 | IPR036628 |
| Gene3D | G3DSA:1.10.1780.10 | - | 3 | 149 | 2.5E-35 | IPR036628 |
| Gene3D | G3DSA:3.40.50.300 | - | 551 | 767 | 8.0E-90 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 345 | 545 | 3.5E-67 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 345 | 545 | 3.5E-67 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 768 | 863 | 1.7E-25 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 151 | 344 | 3.2E-80 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 551 | 767 | 8.0E-90 | IPR027417 |
| Gene3D | G3DSA:1.10.1780.10 | - | 3 | 149 | 2.5E-35 | IPR036628 |
| Gene3D | G3DSA:3.40.50.300 | - | 151 | 344 | 3.2E-80 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 768 | 863 | 1.7E-25 | - |
| SMART | SM01086 | ClpB_D2_small_2 | 768 | 857 | 1.3E-27 | IPR019489 |
| SMART | SM01086 | ClpB_D2_small_2 | 768 | 857 | 1.3E-27 | IPR019489 |
| SMART | SM00382 | AAA_5 | 200 | 345 | 7.7E-11 | IPR003593 |
| SMART | SM00382 | AAA_5 | 200 | 345 | 7.7E-11 | IPR003593 |
| SMART | SM00382 | AAA_5 | 598 | 769 | 2.3E-10 | IPR003593 |
| SMART | SM00382 | AAA_5 | 598 | 769 | 2.3E-10 | IPR003593 |
| ProSiteProfiles | PS51903 | Clp repeat (R) domain profile. | 3 | 148 | 40.154716 | IPR004176 |
| ProSiteProfiles | PS51903 | Clp repeat (R) domain profile. | 3 | 148 | 40.154716 | IPR004176 |
| ProSitePatterns | PS00870 | Chaperonins clpA/B signature 1. | 296 | 308 | - | IPR018368 |
| ProSitePatterns | PS00870 | Chaperonins clpA/B signature 1. | 296 | 308 | - | IPR018368 |
| ProSitePatterns | PS00871 | Chaperonins clpA/B signature 2. | 632 | 650 | - | IPR028299 |
| ProSitePatterns | PS00871 | Chaperonins clpA/B signature 2. | 632 | 650 | - | IPR028299 |
| PRINTS | PR00300 | ATP-dependent Clp protease ATP-binding subunit signature | 709 | 723 | 3.8E-41 | IPR001270 |
| PRINTS | PR00300 | ATP-dependent Clp protease ATP-binding subunit signature | 602 | 620 | 3.8E-41 | IPR001270 |
| PRINTS | PR00300 | ATP-dependent Clp protease ATP-binding subunit signature | 676 | 694 | 3.8E-41 | IPR001270 |
| PRINTS | PR00300 | ATP-dependent Clp protease ATP-binding subunit signature | 602 | 620 | 3.8E-41 | IPR001270 |
| PRINTS | PR00300 | ATP-dependent Clp protease ATP-binding subunit signature | 647 | 665 | 3.8E-41 | IPR001270 |
| PRINTS | PR00300 | ATP-dependent Clp protease ATP-binding subunit signature | 647 | 665 | 3.8E-41 | IPR001270 |
| PRINTS | PR00300 | ATP-dependent Clp protease ATP-binding subunit signature | 709 | 723 | 3.8E-41 | IPR001270 |
| PRINTS | PR00300 | ATP-dependent Clp protease ATP-binding subunit signature | 676 | 694 | 3.8E-41 | IPR001270 |
| Coils | Coil | Coil | 474 | 501 | - | - |
| Coils | Coil | Coil | 407 | 441 | - | - |
| Coils | Coil | Coil | 254 | 274 | - | - |
| Coils | Coil | Coil | 254 | 274 | - | - |
| Coils | Coil | Coil | 407 | 441 | - | - |
| Coils | Coil | Coil | 443 | 470 | - | - |
| Coils | Coil | Coil | 474 | 501 | - | - |
| Coils | Coil | Coil | 443 | 470 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G74310.1 | heat shock protein 101. Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature. | 0 |
| RefSeq | XP_015883323.2 | chaperone protein ClpB1 [Ziziphus jujuba var. spinosa] | 0 |
| P42730 | Chaperone protein ClpB1 OS=Arabidopsis thaliana OX=3702 GN=CLPB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A061FWY3 | Heat shock protein 101 OS=Theobroma cacao OX=3641 GN=TCM_014230 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology