Basic Information
Locus ID:
Lb1G02786
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 284220776 | 284223129 | + | Lb1G02786 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.48 | 35,814.35 Da | 39.07 | 91.88 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 16 | 306 | 1.1E-71 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 16 | 306 | 1.1E-71 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 309 | 8.23E-95 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 309 | 8.23E-95 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 11 | 102 | 5.5E-31 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 11 | 102 | 5.5E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 104 | 312 | 5.3E-69 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 104 | 312 | 5.3E-69 | - |
| SMART | SM00220 | serkin_6 | 16 | 306 | 1.0E-94 | IPR000719 |
| SMART | SM00220 | serkin_6 | 16 | 306 | 1.0E-94 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 16 | 306 | 45.728451 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 16 | 306 | 45.728451 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 143 | 155 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 22 | 45 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 143 | 155 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 22 | 45 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G20930.1 | cyclin-dependent kinase B2;2. Cyclin-dependent kinase, expressed in flowers and suspension cell culture, expression peaks during M phase in synchronized cultures. Required for proper organization of the shoot apical meristem and for hormone signaling. Expressed in the shoot apical meristem. Involved in regulation of the G2/M transition of the mitotic cell cycle. | 0 |
| RefSeq | XP_015879940.2 | cell division control protein 2 homolog D [Ziziphus jujuba var. spinosa] | 0 |
| Q8LG64 | Cyclin-dependent kinase B2-2 OS=Arabidopsis thaliana OX=3702 GN=CDKB2-2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5B7AA96 | Putative cyclin-dependent kinase (Fragment) OS=Davidia involucrata OX=16924 GN=Din_022087 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology