Basic Information
Locus ID:
Lb1G02505
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 270703857 | 270707632 | + | Lb1G02505 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.69 | 72,425.11 Da | 40.66 | 90.75 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 395 | 437 | 3.8E-9 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 395 | 437 | 3.8E-9 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 7 | 44 | 1.9E-6 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 7 | 44 | 1.9E-6 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 19 | 156 | 4.16E-24 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 285 | 478 | 2.95E-36 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 19 | 156 | 4.16E-24 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 285 | 478 | 2.95E-36 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 247 | 328 | 2.9E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 8 | 118 | 1.3E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 8 | 118 | 1.3E-23 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 329 | 392 | 4.5E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 393 | 485 | 3.3E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 119 | 165 | 5.6E-8 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 247 | 328 | 2.9E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 393 | 485 | 3.3E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 329 | 392 | 4.5E-9 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 119 | 165 | 5.6E-8 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 186 | 507 | 9.941162 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 100 | 122 | 7.226811 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 186 | 507 | 9.941162 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 100 | 122 | 7.226811 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 287 | 309 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 287 | 309 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 431 | 446 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 431 | 446 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 647 | 667 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 431 | 467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 431 | 467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 647 | 667 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G08680.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_043725900.1 | probable inactive receptor kinase At5g58300 [Telopea speciosissima] | 0 |
| Q9C9Y8 | Probable inactive receptor kinase At3g08680 OS=Arabidopsis thaliana OX=3702 GN=At3g08680 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1J3K9K3 | Putative inactive receptor kinase OS=Noccaea caerulescens OX=107243 GN=MP_TR17596_c0_g1_i1_g.50335 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 24 | Dusal.0005s00035.v1.0, Dusal.0005s00036.v1.0 ... |
| Plantaginaceae | Plantago ovata | 1 | Pov_00013935 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G02505 |