Basic Information
Locus ID:
Lb1G02221
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 257014100 | 257019051 | + | Lb1G02221 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.86 | 50,227.02 Da | 56.45 | 71.70 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04601 | Domain of unknown function (DUF569) | 1 | 146 | 3.1E-44 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 164 | 285 | 4.1E-46 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 164 | 285 | 4.1E-46 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 1 | 146 | 3.1E-44 | IPR007679 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 6 | 149 | 2.75E-17 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 176 | 286 | 5.89E-14 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 176 | 286 | 5.89E-14 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 6 | 149 | 2.75E-17 | IPR008999 |
| Gene3D | G3DSA:2.80.10.50 | - | 160 | 271 | 1.5E-10 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 4 | 152 | 3.6E-15 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 160 | 271 | 1.5E-10 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 4 | 152 | 3.6E-15 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 306 | 324 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 306 | 324 | - | - |
| Coils | Coil | Coil | 292 | 322 | - | - |
| Coils | Coil | Coil | 292 | 322 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G27100.1 | Actin cross-linking protein. | 0 |
| RefSeq | XP_021856054.1 | uncharacterized protein LOC110795357 isoform X1 [Spinacia oleracea] | 0 |
| TrEMBL | A0A0K9RBQ9 | DUF569 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_088580 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology