Basic Information
Locus ID:
Lb1G02007
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 247826920 | 247831762 | + | Lb1G02007 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 106,077.91 Da | 39.07 | 89.57 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 630 | 890 | 3.94131E-85 | - |
| CDD | cd14066 | STKc_IRAK | 630 | 890 | 3.94131E-85 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 638 | 818 | 1.0E-40 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 638 | 818 | 1.0E-40 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 66 | 2.3E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 234 | 291 | 2.9E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 66 | 2.3E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 234 | 291 | 2.9E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 629 | 893 | 7.69E-65 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 629 | 893 | 7.69E-65 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 390 | 9.86E-41 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 390 | 9.86E-41 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 205 | 275 | 1.0E-15 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 690 | 902 | 5.3E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 276 | 428 | 1.9E-12 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 590 | 689 | 8.8E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 202 | 3.6E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 276 | 428 | 1.9E-12 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 590 | 689 | 8.8E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 202 | 3.6E-34 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 690 | 902 | 5.3E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 205 | 275 | 1.0E-15 | IPR032675 |
| SMART | SM00220 | serkin_6 | 604 | 892 | 2.4E-14 | IPR000719 |
| SMART | SM00220 | serkin_6 | 604 | 892 | 2.4E-14 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 258 | 280 | 8.150895 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 258 | 280 | 8.150895 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 604 | 891 | 31.990202 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 604 | 891 | 31.990202 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 734 | 746 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 734 | 746 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 921 | 946 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 921 | 946 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 916 | 963 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 916 | 963 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_017612428.1 | PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 [Gossypium arboreum] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7J9J195 | Protein kinase domain-containing protein OS=Gossypium armourianum OX=34283 GN=Goarm_012892 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology