Basic Information
Locus ID:
Lb1G02005
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 247733741 | 247738879 | + | Lb1G02005 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.23 | 107,599.49 Da | 38.64 | 90.54 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 640 | 910 | 5.99161E-92 | - |
| CDD | cd14066 | STKc_IRAK | 640 | 910 | 5.99161E-92 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 72 | 2.4E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 251 | 308 | 3.0E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 638 | 854 | 1.2E-44 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 251 | 308 | 3.0E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 72 | 2.4E-6 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 638 | 854 | 1.2E-44 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 54 | 403 | 5.89E-50 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 54 | 403 | 5.89E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 620 | 913 | 1.34E-75 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 620 | 913 | 1.34E-75 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 193 | 419 | 6.0E-38 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 607 | 709 | 1.1E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 710 | 922 | 9.1E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 192 | 5.1E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 193 | 419 | 6.0E-38 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 607 | 709 | 1.1E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 710 | 922 | 9.1E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 192 | 5.1E-41 | IPR032675 |
| SMART | SM00220 | serkin_6 | 634 | 912 | 4.0E-28 | IPR000719 |
| SMART | SM00220 | serkin_6 | 634 | 912 | 4.0E-28 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 275 | 297 | 7.465533 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 634 | 911 | 37.17738 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 275 | 297 | 7.465533 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 634 | 911 | 37.17738 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 640 | 662 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 754 | 766 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 640 | 662 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 754 | 766 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 941 | 966 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 934 | 984 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 941 | 966 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 934 | 984 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021299996.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Herrania umbratica] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J1BKK3 | probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Herrania umbratica OX=108875 GN=LOC110428494 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology