Basic Information
Locus ID:
Lb1G01738
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Encoded by
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 231955079 | 231957452 | - | Lb1G01738 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 75,577.20 Da | 39.41 | 77.10 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03108 | MuDR family transposase | 193 | 257 | 6.8E-8 | IPR004332 |
| Pfam | PF10551 | MULE transposase domain | 293 | 382 | 2.9E-12 | IPR018289 |
| Pfam | PF04434 | SWIM zinc finger | 549 | 575 | 2.1E-6 | IPR007527 |
| Pfam | PF03108 | MuDR family transposase | 193 | 257 | 6.8E-8 | IPR004332 |
| Pfam | PF04434 | SWIM zinc finger | 549 | 575 | 2.1E-6 | IPR007527 |
| Pfam | PF10551 | MULE transposase domain | 293 | 382 | 2.9E-12 | IPR018289 |
| SMART | SM00575 | 26again6 | 554 | 581 | 4.9E-4 | IPR006564 |
| SMART | SM00575 | 26again6 | 554 | 581 | 4.9E-4 | IPR006564 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 547 | 579 | 9.717718 | IPR007527 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 547 | 579 | 9.717718 | IPR007527 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64255.1 | MuDR family transposase. | 0 |
| RefSeq | XP_025665054.1 | uncharacterized protein LOC112763650 [Arachis hypogaea] | 0 |
| TrEMBL | A0A8B8MA13 | uncharacterized protein LOC113871751 OS=Abrus precatorius OX=3816 GN=LOC113871751 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||