Basic Information
Locus ID:
Lb1G01717
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
NIK2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 230295107 | 230299369 | + | Lb1G01717 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.81 | 69,061.31 Da | 38.61 | 96.56 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 70 | 3.2E-10 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 304 | 570 | 1.4E-43 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 304 | 570 | 1.4E-43 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 70 | 3.2E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 122 | 181 | 6.9E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 122 | 181 | 6.9E-10 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 195 | 3.78E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 279 | 573 | 7.01E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 195 | 3.78E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 279 | 573 | 7.01E-76 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 212 | 5.4E-53 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 272 | 379 | 6.4E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 212 | 5.4E-53 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 380 | 592 | 1.6E-62 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 380 | 592 | 1.6E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 272 | 379 | 6.4E-37 | - |
| SMART | SM00220 | serkin_6 | 303 | 558 | 1.8E-36 | IPR000719 |
| SMART | SM00220 | serkin_6 | 303 | 558 | 1.8E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 303 | 578 | 35.707443 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 303 | 578 | 35.707443 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 422 | 434 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 422 | 434 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 309 | 331 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 309 | 331 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 590 | 614 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 590 | 614 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 623 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 623 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25560.1 | NSP-interacting kinase 2. | 0 |
| RefSeq | XP_028081117.1 | protein NSP-INTERACTING KINASE 2-like [Camellia sinensis] | 0 |
| Q8RY65 | Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis thaliana OX=3702 GN=NIK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4S4DZW0 | Protein kinase domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_010283 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology