Basic Information
Locus ID:
Lb1G01657
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 225177113 | 225180316 | + | Lb1G01657 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 66,067.51 Da | 42.37 | 89.55 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 474 | 601 | 1.9E-21 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 86 | 123 | 1.6E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 86 | 123 | 1.6E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 474 | 601 | 1.9E-21 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 423 | 602 | 1.62E-40 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 423 | 602 | 1.62E-40 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 41 | 235 | 2.42E-23 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 41 | 235 | 2.42E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 251 | 5.3E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 251 | 5.3E-39 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 461 | 603 | 1.0E-40 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 461 | 603 | 1.0E-40 | - |
| SMART | SM00369 | LRR_typ_2 | 87 | 110 | 2.6E-4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 111 | 135 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 111 | 135 | 240.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 440 | 603 | 3.5E-4 | IPR000719 |
| SMART | SM00220 | serkin_6 | 440 | 603 | 3.5E-4 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 87 | 110 | 2.6E-4 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 89 | 110 | 7.1113 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 390 | 604 | 23.439131 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 390 | 604 | 23.439131 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 89 | 110 | 7.1113 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 536 | 548 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 536 | 548 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_028092959.1 | receptor protein kinase TMK1-like [Camellia sinensis] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2R6RDY7 | Receptor protein kinase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc07914 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology