Basic Information
Locus ID:
Lb1G01534
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 219128715 | 219132155 | - | Lb1G01534 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 42,728.51 Da | 38.63 | 79.67 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 86 | 382 | 5.7E-59 | IPR003726 |
| Pfam | PF02574 | Homocysteine S-methyltransferase | 86 | 382 | 5.7E-59 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 81 | 384 | 6.41E-63 | IPR036589 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 81 | 384 | 6.41E-63 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 75 | 381 | 6.6E-75 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 75 | 381 | 6.6E-75 | IPR036589 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 73 | 382 | 33.605568 | IPR003726 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 73 | 382 | 33.605568 | IPR003726 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 63 | - | - |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.1 | Homocysteine S-methyltransferase family protein. | 0 |
| RefSeq | XP_006437663.1 | homocysteine S-methyltransferase 1 [Citrus clementina] | 0 |
| A4ZGQ8 | Homocysteine S-methyltransferase 1 OS=Brassica oleracea var. italica OX=36774 GN=HMT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B7BGY3 | Putative homocysteine S-methyltransferase 1 OS=Davidia involucrata OX=16924 GN=Din_037225 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology