Basic Information
Locus ID:
Lb1G01526
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 218278262 | 218282345 | + | Lb1G01526 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 36,955.51 Da | 30.57 | 89.59 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 30 | 331 | 1.6E-74 | IPR003726 |
| Pfam | PF02574 | Homocysteine S-methyltransferase | 30 | 331 | 1.6E-74 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 25 | 333 | 7.46E-81 | IPR036589 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 25 | 333 | 7.46E-81 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 19 | 330 | 1.8E-98 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 19 | 330 | 1.8E-98 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 288 | 337 | 0.1 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 12 | 223 | 7.2E-9 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 288 | 337 | 0.1 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 12 | 223 | 7.2E-9 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 17 | 331 | 48.508854 | IPR003726 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 17 | 331 | 48.508854 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.1 | Homocysteine S-methyltransferase family protein. | 0 |
| RefSeq | XP_018825315.2 | homocysteine S-methyltransferase 1 [Juglans regia] | 0 |
| A4ZGQ8 | Homocysteine S-methyltransferase 1 OS=Brassica oleracea var. italica OX=36774 GN=HMT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B7BGY3 | Putative homocysteine S-methyltransferase 1 OS=Davidia involucrata OX=16924 GN=Din_037225 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology