Basic Information
Locus ID:
Lb1G00886
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 144293728 | 144298598 | - | Lb1G00886 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 69,152.33 Da | 39.28 | 99.79 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 306 | 575 | 3.9E-41 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 72 | 1.6E-11 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 306 | 575 | 3.9E-41 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 124 | 183 | 5.1E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 72 | 1.6E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 124 | 183 | 5.1E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 290 | 586 | 1.03E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 196 | 5.53E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 290 | 586 | 1.03E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 196 | 5.53E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 214 | 2.2E-52 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 273 | 381 | 3.4E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 214 | 2.2E-52 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 382 | 598 | 2.6E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 273 | 381 | 3.4E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 382 | 598 | 2.6E-62 | - |
| SMART | SM00220 | serkin_6 | 305 | 578 | 2.9E-31 | IPR000719 |
| SMART | SM00220 | serkin_6 | 305 | 578 | 2.9E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 305 | 588 | 34.421249 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 305 | 588 | 34.421249 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 311 | 333 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 428 | 440 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 428 | 440 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 311 | 333 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 587 | 606 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 587 | 606 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 0 |
| RefSeq | XP_007044708.1 | PREDICTED: protein NSP-INTERACTING KINASE 3 [Theobroma cacao] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A061E698 | Nsp-interacting kinase 3 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_010430 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology