Basic Information
Locus ID:
Lb1G00551
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 100692940 | 100694443 | - | Lb1G00551 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 37,531.54 Da | 22.76 | 76.53 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 21 | 149 | 6.24249E-41 | IPR033734 |
| CDD | cd09612 | Jacalin | 176 | 309 | 1.04677E-32 | IPR033734 |
| CDD | cd09612 | Jacalin | 21 | 149 | 6.24249E-41 | IPR033734 |
| CDD | cd09612 | Jacalin | 176 | 309 | 1.04677E-32 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 21 | 150 | 3.8E-31 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 176 | 309 | 1.6E-23 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 176 | 309 | 1.6E-23 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 21 | 150 | 3.8E-31 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 10 | 149 | 1.27E-40 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 166 | 308 | 1.83E-35 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 166 | 308 | 1.83E-35 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 10 | 149 | 1.27E-40 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 2 | 150 | 2.2E-51 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 2 | 150 | 2.2E-51 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 155 | 309 | 1.8E-42 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 155 | 309 | 1.8E-42 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 176 | 310 | 5.8E-27 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 21 | 151 | 1.2E-36 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 176 | 310 | 5.8E-27 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 21 | 151 | 1.2E-36 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 165 | 310 | 39.859539 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 10 | 151 | 45.036858 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 165 | 310 | 39.859539 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 10 | 151 | 45.036858 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.2 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_021667091.1 | jacalin-related lectin 3-like [Hevea brasiliensis] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A6MAU4 | Jacalin-related lectin 3-like OS=Hevea brasiliensis OX=3981 GN=GH714_006156 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology