Basic Information
Locus ID:
Lb1G00354
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
gag-polypeptide of LTR copia-type
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 62692000 | 62698818 | + | Lb1G00354 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.84 | 18,151.72 Da | 41.67 | 67.53 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 110 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 113 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 110 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 113 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_012842057.1 | PREDICTED: uncharacterized protein LOC105962301 isoform X1 [Erythranthe guttata] | 0 |
| TrEMBL | A0A833UXC3 | Retrotran_gag_3 domain-containing protein OS=Juglans regia OX=51240 GN=F2P56_020015 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology