Basic Information
Locus ID:
Lb1G00291
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
TdcA1-ORF2 protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 53766978 | 53768187 | + | Lb1G00291 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 29,975.08 Da | 51.80 | 62.47 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13963 | Transposase-associated domain | 6 | 88 | 5.8E-19 | IPR029480 |
| Pfam | PF02992 | Transposase family tnp2 | 168 | 247 | 7.0E-33 | IPR004242 |
| Pfam | PF13963 | Transposase-associated domain | 6 | 88 | 5.8E-19 | IPR029480 |
| Pfam | PF02992 | Transposase family tnp2 | 168 | 247 | 7.0E-33 | IPR004242 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_050238340.1 | uncharacterized protein LOC126687826 [Mercurialis annua] | 0 |
| TrEMBL | A0A151S5Q2 | Transpos_assoc domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_028172 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||