Basic Information
Locus ID:
Lb0G38388
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Domain of unknown function (DUF3403)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold914 | 7705 | 11687 | + | Lb0G38388 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 76,472.28 Da | 36.60 | 86.93 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 361 | 627 | 3.22911E-99 | - |
| CDD | cd14066 | STKc_IRAK | 361 | 627 | 3.22911E-99 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 42 | 137 | 4.0E-18 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 156 | 251 | 1.4E-8 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 357 | 624 | 1.7E-47 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 357 | 624 | 1.7E-47 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 156 | 251 | 1.4E-8 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 42 | 137 | 4.0E-18 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 340 | 652 | 9.17E-82 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 340 | 652 | 9.17E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 35 | 139 | 4.8E-22 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 432 | 632 | 2.6E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 314 | 430 | 1.9E-37 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 146 | 252 | 1.6E-17 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 146 | 252 | 1.6E-17 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 35 | 139 | 4.8E-22 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 432 | 632 | 2.6E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 314 | 430 | 1.9E-37 | - |
| SMART | SM00220 | serkin_6 | 355 | 626 | 3.5E-34 | IPR000719 |
| SMART | SM00220 | serkin_6 | 355 | 626 | 3.5E-34 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 146 | 253 | 15.918568 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 355 | 630 | 38.901726 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 37 | 140 | 17.891926 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 355 | 630 | 38.901726 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 37 | 140 | 17.891926 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 146 | 253 | 15.918568 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 476 | 488 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 361 | 383 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 361 | 383 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 476 | 488 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021746898.1 | cysteine-rich receptor-like protein kinase 25 [Chenopodium quinoa] | 0 |
| O65468 | Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CRK8 PE=3 SV=2 | 0 | |
| TrEMBL | F6HWQ6 | Cysteine-rich receptor-like protein kinase 10 OS=Vitis vinifera OX=29760 GN=VIT_00s0366g00020 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||