Basic Information
Locus ID:
Lb0G38321
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
F-box Kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold844 | 1940 | 3246 | + | Lb0G38321 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.02 | 45,031.62 Da | 52.15 | 67.83 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 193 | 234 | 1.7E-10 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 193 | 234 | 1.7E-10 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 133 | 394 | 1.31E-22 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 37 | 78 | 8.63E-7 | IPR036047 |
| SUPERFAMILY | SSF81383 | F-box domain | 37 | 78 | 8.63E-7 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 133 | 394 | 1.31E-22 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 122 | 403 | 5.2E-17 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 122 | 403 | 5.2E-17 | IPR015915 |
| SMART | SM00612 | kelc_smart | 201 | 248 | 5.9E-4 | IPR006652 |
| SMART | SM00256 | fbox_2 | 40 | 80 | 6.8E-4 | IPR001810 |
| SMART | SM00612 | kelc_smart | 201 | 248 | 5.9E-4 | IPR006652 |
| SMART | SM00256 | fbox_2 | 40 | 80 | 6.8E-4 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59940.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_021855601.1 | F-box/kelch-repeat protein SKIP20 isoform X2 [Spinacia oleracea] | 0 |
| Q9M1Y1 | F-box/kelch-repeat protein SKIP20 OS=Arabidopsis thaliana OX=3702 GN=SKIP20 PE=1 SV=1 | 0 | |
| TrEMBL | B9STA7 | F-box domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_0365370 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology