Basic Information
Locus ID:
Lb0G38278
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold79 | 48977 | 50448 | + | Lb0G38278 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 41,712.36 Da | 28.85 | 80.65 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 20 | 150 | 3.72935E-40 | IPR033734 |
| CDD | cd09612 | Jacalin | 235 | 369 | 2.27222E-28 | IPR033734 |
| CDD | cd09612 | Jacalin | 235 | 369 | 2.27222E-28 | IPR033734 |
| CDD | cd09612 | Jacalin | 20 | 150 | 3.72935E-40 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 235 | 369 | 3.9E-22 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 20 | 150 | 6.1E-28 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 20 | 150 | 6.1E-28 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 235 | 369 | 3.9E-22 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 10 | 149 | 3.14E-37 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 224 | 368 | 1.26E-33 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 10 | 149 | 3.14E-37 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 224 | 368 | 1.26E-33 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 210 | 369 | 6.2E-39 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 2 | 150 | 2.3E-46 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 2 | 150 | 2.3E-46 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 210 | 369 | 6.2E-39 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 235 | 370 | 6.9E-23 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 20 | 151 | 1.9E-33 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 235 | 370 | 6.9E-23 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 20 | 151 | 1.9E-33 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 9 | 151 | 43.311085 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 224 | 370 | 36.745647 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 9 | 151 | 43.311085 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 224 | 370 | 36.745647 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.3 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_031268962.1 | jacalin-related lectin 3-like isoform X1 [Pistacia vera] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2R6RMU6 | Jacalin-related lectin like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc04605 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology