Basic Information
Locus ID:
Lb0G38063
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold567 | 23418 | 28147 | - | Lb0G38063 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 42,925.56 Da | 34.24 | 75.41 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 240 | 373 | 8.68046E-29 | IPR033734 |
| CDD | cd09612 | Jacalin | 21 | 151 | 8.07391E-39 | IPR033734 |
| CDD | cd09612 | Jacalin | 240 | 373 | 8.68046E-29 | IPR033734 |
| CDD | cd09612 | Jacalin | 21 | 151 | 8.07391E-39 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 21 | 151 | 7.9E-31 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 240 | 373 | 6.1E-23 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 240 | 373 | 6.1E-23 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 21 | 151 | 7.9E-31 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 230 | 372 | 1.96E-31 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 10 | 150 | 1.44E-40 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 230 | 372 | 1.96E-31 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 10 | 150 | 1.44E-40 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 215 | 372 | 2.0E-38 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 3 | 151 | 7.2E-51 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 3 | 151 | 7.2E-51 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 215 | 372 | 2.0E-38 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 240 | 374 | 4.9E-28 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 21 | 152 | 1.1E-31 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 240 | 374 | 4.9E-28 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 21 | 152 | 1.1E-31 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 229 | 374 | 38.762173 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 10 | 152 | 46.631321 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 10 | 152 | 46.631321 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 229 | 374 | 38.762173 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.3 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_021851043.1 | jacalin-related lectin 3-like isoform X2 [Spinacia oleracea] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9R622 | Jacalin-related lectin 3-like OS=Spinacia oleracea OX=3562 GN=SOVF_109100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology