Basic Information
Locus ID:
Lb0G38000
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
PPCK4
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold502 | 47141 | 48922 | - | Lb0G38000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.80 | 34,746.10 Da | 48.69 | 82.97 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 41 | 302 | 3.614E-123 | - |
| CDD | cd05117 | STKc_CAMK | 41 | 302 | 3.614E-123 | - |
| Pfam | PF00069 | Protein kinase domain | 43 | 303 | 2.1E-67 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 43 | 303 | 2.1E-67 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 21 | 306 | 1.89E-88 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 21 | 306 | 1.89E-88 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 129 | 310 | 1.6E-66 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 8 | 127 | 3.6E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 129 | 310 | 1.6E-66 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 8 | 127 | 3.6E-23 | - |
| SMART | SM00220 | serkin_6 | 42 | 303 | 2.3E-94 | IPR000719 |
| SMART | SM00220 | serkin_6 | 42 | 303 | 2.3E-94 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 6 | 300 | 4.4E-27 | - |
| PIRSF | PIRSF000654 | ILK | 6 | 300 | 4.4E-27 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 42 | 303 | 48.45631 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 42 | 303 | 48.45631 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 48 | 71 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 164 | 176 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 164 | 176 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 48 | 71 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04012 (ErbB signaling pathway)
map04012 (ErbB signaling pathway)
ko04020 (Calcium signaling pathway)
map04020 (Calcium signaling pathway)
ko04024 (cAMP signaling pathway)
map04024 (cAMP signaling pathway)
ko04066 (HIF-1 signaling pathway)
map04066 (HIF-1 signaling pathway)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
map04217 (Necroptosis)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04745 (Phototransduction - fly)
map04745 (Phototransduction - fly)
ko04750 (Inflammatory mediator regulation of TRP channels)
map04750 (Inflammatory mediator regulation of TRP channels)
ko04916 (Melanogenesis)
map04916 (Melanogenesis)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08650.1 | phosphoenolpyruvate carboxylase kinase 1. Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light. | 0 |
| RefSeq | XP_021742155.1 | phosphoenolpyruvate carboxylase kinase 1-like [Chenopodium quinoa] | 0 |
| Q9SPK4 | Phosphoenolpyruvate carboxylase kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PPCK1 PE=1 SV=1 | 0 | |
| TrEMBL | Q949L9 | Putative phosphoenolpyruvate carboxylase kinase OS=Beta vulgaris OX=161934 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology