Basic Information
Locus ID:
Lb0G37672
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2427 | 9255 | 11700 | - | Lb0G37672 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 36,967.58 Da | 30.22 | 95.24 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 14 | 327 | 4.7E-75 | IPR003726 |
| Pfam | PF02574 | Homocysteine S-methyltransferase | 14 | 327 | 4.7E-75 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 11 | 336 | 1.96E-81 | IPR036589 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 11 | 336 | 1.96E-81 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 4 | 326 | 5.7E-98 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 4 | 326 | 5.7E-98 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 130 | 253 | 360.0 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 280 | 338 | 0.042 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 4 | 104 | 5.0E-7 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 130 | 253 | 360.0 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 4 | 104 | 5.0E-7 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 280 | 338 | 0.042 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 1 | 328 | 46.054039 | IPR003726 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 1 | 328 | 46.054039 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_017978530.1 | PREDICTED: homocysteine S-methyltransferase 2 [Theobroma cacao] | 0 |
| P56707 | Selenocysteine methyltransferase OS=Astragalus bisulcatus OX=20406 GN=SMTA PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A3A117 | Homocysteine S-methyltransferase 2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110637pilonHSYRG00355 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology