Basic Information
Locus ID:
Lb0G37662
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
f-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2406 | 10782 | 12875 | - | Lb0G37662 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.41 | 46,320.25 Da | 54.38 | 92.28 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 15 | 48 | 4.6E-8 | IPR001810 |
| Pfam | PF00646 | F-box domain | 15 | 48 | 4.6E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 12 | 52 | 3.66E-6 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 57 | 155 | 9.1E-7 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 12 | 52 | 3.66E-6 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 57 | 155 | 9.1E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 54 | 162 | 2.8E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 54 | 162 | 2.8E-11 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 2 | 49 | 10.186324 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 2 | 49 | 10.186324 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01620.1 | RNI-like superfamily protein. | 0 |
| RefSeq | XP_008221444.1 | PREDICTED: F-box protein SKIP28 [Prunus mume] | 0 |
| Q9ZU90 | F-box protein SKIP28 OS=Arabidopsis thaliana OX=3702 GN=SKIP28 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067FMA3 | F-box domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g020465mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology