Basic Information
Locus ID:
Lb0G37506
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold214 | 5545 | 7882 | + | Lb0G37506 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.06 | 56,240.86 Da | 35.96 | 93.68 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 87 | 162 | 2.80686E-10 | - |
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 87 | 162 | 2.80686E-10 | - |
| Pfam | PF00651 | BTB/POZ domain | 87 | 177 | 6.3E-12 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 221 | 292 | 2.0E-7 | IPR011705 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 221 | 292 | 2.0E-7 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 87 | 177 | 6.3E-12 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 89 | 177 | 1.73E-11 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 89 | 177 | 1.73E-11 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 7 | 179 | 1.0E-13 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 216 | 309 | 1.0E-6 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 7 | 179 | 1.0E-13 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 216 | 309 | 1.0E-6 | - |
| SMART | SM00875 | BACK_2 | 171 | 294 | 0.0096 | IPR011705 |
| SMART | SM00225 | BTB_4 | 78 | 179 | 4.5E-5 | IPR000210 |
| SMART | SM00875 | BACK_2 | 171 | 294 | 0.0096 | IPR011705 |
| SMART | SM00225 | BTB_4 | 78 | 179 | 4.5E-5 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 87 | 147 | 10.013133 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 87 | 147 | 10.013133 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_029119096.1 | BTB/POZ domain-containing protein POB1 isoform X2 [Elaeis guineensis] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6A4P8K8 | Putative chromatin remodeling & transcription regulator BTB-POZ family OS=Lupinus albus OX=3870 GN=Lal_00003989 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||