Basic Information
Locus ID:
Lb0G37486
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2106 | 3590 | 8956 | - | Lb0G37486 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 97,157.53 Da | 39.11 | 111.82 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 800 | 892 | 1.6E-8 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 800 | 892 | 1.6E-8 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 295 | 683 | 4.32E-66 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 295 | 683 | 4.32E-66 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 783 | 903 | 2.7E-19 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 783 | 903 | 2.7E-19 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 79 | 332 | 2.04E-49 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 79 | 332 | 2.04E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 208 | 303 | 3.3E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 304 | 402 | 4.7E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 418 | 723 | 1.8E-89 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 53 | 207 | 1.4E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 208 | 303 | 3.3E-24 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 781 | 885 | 7.8E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 304 | 402 | 4.7E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 53 | 207 | 1.4E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 418 | 723 | 1.8E-89 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 781 | 885 | 7.8E-19 | - |
| SMART | SM00369 | LRR_typ_2 | 577 | 601 | 54.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 313 | 337 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 673 | 698 | 87.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 289 | 310 | 310.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 650 | 675 | 100.0 | - |
| SMART | SM00369 | LRR_typ_2 | 144 | 167 | 280.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 433 | 462 | 28.0 | - |
| SMART | SM00369 | LRR_typ_2 | 505 | 529 | 19.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 505 | 526 | 640.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 168 | 183 | 190.0 | - |
| SMART | SM00369 | LRR_typ_2 | 433 | 457 | 0.96 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 602 | 625 | 310.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 433 | 457 | 0.96 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 168 | 192 | 49.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 505 | 526 | 640.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 168 | 183 | 190.0 | - |
| SMART | SM00369 | LRR_typ_2 | 505 | 529 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 313 | 337 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 144 | 167 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 577 | 601 | 54.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 673 | 698 | 87.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 602 | 625 | 310.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 650 | 675 | 100.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 289 | 310 | 310.0 | - |
| SMART | SM00369 | LRR_typ_2 | 168 | 192 | 49.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 433 | 462 | 28.0 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 652 | 674 | 7.704254 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 798 | 906 | 11.863386 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 652 | 674 | 7.704254 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 798 | 906 | 11.863386 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 804 | 827 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 804 | 827 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 436 | 449 | 2.7E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 505 | 518 | 2.7E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 436 | 449 | 2.7E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 505 | 518 | 2.7E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G48940.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_034684915.1 | receptor-like protein kinase 2 [Vitis riparia] | 0 |
| C0LGV1 | LRR receptor-like serine/threonine-protein kinase RGI2 OS=Arabidopsis thaliana OX=3702 GN=RGI2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6REQ8 | Protein kinase domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_014894 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000040486 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG06.740 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb0G37486, Lb3G20571 |
| Salicaceae | Populus euphratica | 1 | populus_peu34874 |