Basic Information
Locus ID:
Lb0G37334
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1851 | 21883 | 27410 | + | Lb0G37334 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.66 | 81,412.59 Da | 34.17 | 95.98 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 440 | 706 | 1.36183E-102 | - |
| CDD | cd09272 | RNase_HI_RT_Ty1 | 96 | 233 | 1.90363E-79 | - |
| CDD | cd14066 | STKc_IRAK | 440 | 706 | 1.36183E-102 | - |
| CDD | cd09272 | RNase_HI_RT_Ty1 | 96 | 233 | 1.90363E-79 | - |
| Pfam | PF00069 | Protein kinase domain | 436 | 703 | 2.2E-48 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 436 | 703 | 2.2E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 417 | 710 | 9.58E-85 | IPR011009 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 23 | 203 | 2.49E-10 | IPR043502 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 23 | 203 | 2.49E-10 | IPR043502 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 417 | 710 | 9.58E-85 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 417 | 509 | 1.5E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 510 | 719 | 8.4E-66 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 417 | 509 | 1.5E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 510 | 719 | 8.4E-66 | - |
| SMART | SM00220 | serkin_6 | 434 | 705 | 5.2E-39 | IPR000719 |
| SMART | SM00220 | serkin_6 | 434 | 705 | 5.2E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 434 | 711 | 39.551891 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 434 | 711 | 39.551891 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 556 | 568 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 556 | 568 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 440 | 462 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 440 | 462 | - | IPR017441 |
| Coils | Coil | Coil | 454 | 474 | - | - |
| Coils | Coil | Coil | 454 | 474 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G42960.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_002283589.2 | PREDICTED: probable receptor-like protein kinase At2g42960 [Vitis vinifera] | 0 |
| Q9SJG2 | Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 GN=At2g42960 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5B7C361 | Protein kinase domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_044796 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology