Basic Information
Locus ID:
Lb0G37254
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
CDPK9
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold174 | 17549 | 19429 | + | Lb0G37254 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 35,123.49 Da | 42.73 | 73.59 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 66 | 214 | 1.9E-25 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 66 | 214 | 1.9E-25 | IPR000719 |
| Pfam | PF13405 | EF-hand domain | 278 | 303 | 3.3E-7 | IPR002048 |
| Pfam | PF13405 | EF-hand domain | 278 | 303 | 3.3E-7 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 238 | 305 | 1.61E-17 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 238 | 1.82E-39 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 238 | 305 | 1.61E-17 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 238 | 1.82E-39 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 56 | 1.4E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 63 | 252 | 8.1E-37 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 253 | 267 | 7.4E-17 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 253 | 267 | 7.4E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 63 | 252 | 8.1E-37 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 268 | 305 | 7.4E-17 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 268 | 305 | 7.4E-17 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 56 | 1.4E-10 | - |
| SMART | SM00054 | efh_1 | 277 | 305 | 0.0065 | IPR002048 |
| SMART | SM00220 | serkin_6 | 5 | 214 | 2.0E-13 | IPR000719 |
| SMART | SM00220 | serkin_6 | 5 | 214 | 2.0E-13 | IPR000719 |
| SMART | SM00054 | efh_1 | 241 | 269 | 1.3 | IPR002048 |
| SMART | SM00054 | efh_1 | 241 | 269 | 1.3 | IPR002048 |
| SMART | SM00054 | efh_1 | 277 | 305 | 0.0065 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 273 | 308 | 14.513405 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 214 | 20.470991 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 237 | 272 | 9.93856 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 273 | 308 | 14.513405 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 237 | 272 | 9.93856 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 214 | 20.470991 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 11 | 34 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 250 | 262 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 11 | 34 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 286 | 298 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 250 | 262 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 286 | 298 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38910.1 | calcium-dependent protein kinase 20. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_052202355.1 | calcium-dependent protein kinase 24-like isoform X2 [Diospyros lotus] | 0 |
| Q2QX45 | Calcium-dependent protein kinase 28 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK28 PE=3 SV=1 | 0 | |
| TrEMBL | J3SIC5 | Calmcium/calmodulin-dependent protein kinase CDPK2 OS=Beta vulgaris subsp. vulgaris OX=3555 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Lb0G37254.