Basic Information
Locus ID:
Lb0G36806
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1118 | 22607 | 24165 | - | Lb0G36806 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.36 | 36,315.48 Da | 29.16 | 72.79 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 194 | 335 | 1.4231E-26 | IPR033734 |
| CDD | cd09612 | Jacalin | 194 | 335 | 1.4231E-26 | IPR033734 |
| CDD | cd09612 | Jacalin | 29 | 152 | 5.68858E-34 | IPR033734 |
| CDD | cd09612 | Jacalin | 29 | 152 | 5.68858E-34 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 194 | 335 | 4.3E-22 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 21 | 152 | 7.9E-31 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 194 | 335 | 4.3E-22 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 21 | 152 | 7.9E-31 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 11 | 151 | 6.8E-40 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 11 | 151 | 6.8E-40 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 184 | 334 | 2.22E-30 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 184 | 334 | 2.22E-30 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 174 | 335 | 8.9E-39 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 3 | 152 | 1.3E-49 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 3 | 152 | 1.3E-49 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 174 | 335 | 8.9E-39 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 194 | 336 | 4.5E-29 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 21 | 153 | 3.0E-38 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 21 | 153 | 3.0E-38 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 194 | 336 | 4.5E-29 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 10 | 153 | 44.933685 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 183 | 336 | 35.15118 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 183 | 336 | 35.15118 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 10 | 153 | 44.933685 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.2 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_021667091.1 | jacalin-related lectin 3-like [Hevea brasiliensis] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A835DS48 | Jacalin-type lectin domain-containing protein OS=Tetracentron sinense OX=13715 GN=HHK36_003068 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology