Basic Information
Locus ID:
GOSA_00028435
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig605 | 111612 | 117641 | + | GOSA_00028435 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 69,694.29 Da | 42.38 | 90.09 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 19 | 123 | 3.10335E-48 | - |
| Pfam | PF00651 | BTB/POZ domain | 27 | 113 | 2.6E-7 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 213 | 476 | 4.2E-95 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 17 | 114 | 3.69E-17 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 10 | 116 | 1.4E-11 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 213 | 500 | 94.072472 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 97 | 11.274735 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 603 | 631 | - | - |
| Coils | Coil | Coil | 548 | 575 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_021725340.1 | BTB/POZ domain-containing protein At1g30440-like [Chenopodium quinoa] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803N9X6 | BTB/POZ domain-containing protein At1g30440 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology