Basic Information
Locus ID:
GOSA_00028114
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig1262 | 248411 | 253386 | - | GOSA_00028114 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.99 | 88,968.55 Da | 43.81 | 78.74 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 428 | 688 | 6.46745E-88 | - |
| CDD | cd01989 | STK_N | 14 | 149 | 1.12356E-50 | - |
| Pfam | PF00069 | Protein kinase domain | 427 | 679 | 3.9E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 404 | 681 | 1.19E-68 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 15 | 125 | 1.59E-7 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 388 | 494 | 2.2E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 495 | 699 | 2.1E-48 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 12 | 149 | 1.3E-7 | IPR014729 |
| SMART | SM00220 | serkin_6 | 422 | 686 | 4.4E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 422 | 685 | 34.675663 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 540 | 552 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 721 | 741 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 191 | 229 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 395 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 703 | 741 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 212 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 706 | 720 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 394 | - | - |
| Coils | Coil | Coil | 348 | 403 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_021763738.1 | U-box domain-containing protein 52-like isoform X2 [Chenopodium quinoa] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803N1Z3 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology