Basic Information
Locus ID:
GOSA_00028112
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Short Name:
CERK1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig1262 | 226459 | 238662 | - | GOSA_00028112 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 66,312.44 Da | 32.53 | 90.11 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 158 | 199 | 0.00471671 | IPR018392 |
| CDD | cd14066 | STKc_IRAK | 319 | 585 | 9.68906E-87 | - |
| CDD | cd00118 | LysM | 33 | 77 | 6.68699E-6 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 314 | 579 | 5.0E-47 | IPR001245 |
| Pfam | PF01476 | LysM domain | 34 | 78 | 3.4E-6 | IPR018392 |
| SUPERFAMILY | SSF54106 | LysM domain | 33 | 78 | 1.28E-6 | IPR036779 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 294 | 582 | 1.62E-77 | IPR011009 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 26 | 83 | 5.4E-10 | IPR036779 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 284 | 383 | 1.6E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 384 | 592 | 4.1E-56 | - |
| SMART | SM00220 | serkin_6 | 313 | 586 | 3.5E-43 | IPR000719 |
| SMART | SM00257 | LysM_2 | 94 | 140 | 12.0 | IPR018392 |
| SMART | SM00257 | LysM_2 | 33 | 78 | 1.4E-4 | IPR018392 |
| SMART | SM00257 | LysM_2 | 159 | 200 | 11.0 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 158 | 201 | 8.746705 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 313 | 586 | 39.043068 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 32 | 77 | 10.793041 | IPR018392 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 319 | 341 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 428 | 440 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_021856598.1 | chitin elicitor receptor kinase 1-like isoform X1 [Spinacia oleracea] | 0 |
| Q6UD73 | LysM domain receptor-like kinase 3 OS=Medicago truncatula OX=3880 GN=LYK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LB77 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology