Basic Information
Locus ID:
GOSA_00026923
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig381 | 2037 | 12409 | - | GOSA_00026923 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.51 | 48,955.04 Da | 42.16 | 115.70 | 0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 18 | 419 | 2.95643E-55 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 58 | 380 | 4.6E-23 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 59 | 434 | 5.36E-38 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 31 | 421 | 7.9E-35 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 18 | 426 | 10.654375 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 76 | 92 | - | IPR005829 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 304 | 325 | 2.1E-5 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 151 | 173 | 2.1E-5 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 364 | 387 | 2.1E-5 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 58 | 77 | 2.1E-5 | IPR001958 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_010681370.2 | hippocampus abundant transcript-like protein 1 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A0K9R9Y7 | MFS domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_090120 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology