Basic Information
Locus ID:
GOSA_00026535
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig333 | 420086 | 427776 | - | GOSA_00026535 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 18,932.21 Da | 66.80 | 71.86 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 7 | 160 | 4.54805E-71 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 8 | 159 | 8.9E-46 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 1 | 165 | 6.16E-57 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 1 | 163 | 3.0E-64 | IPR016135 |
| SMART | SM00212 | ubc_7 | 7 | 165 | 1.2E-60 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 4 | 165 | 55.811771 | IPR000608 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02760.1 | ubiquiting-conjugating enzyme 2. ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene. | 0 |
| RefSeq | XP_023875089.1 | ubiquitin-conjugating enzyme E2 2-like [Quercus suber] | 0 |
| P42745 | Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana OX=3702 GN=UBC2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7HHV5 | UBC core domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_017722 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology