Basic Information
Locus ID:
GOSA_00025368
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig892 | 53344 | 56148 | - | GOSA_00025368 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.54 | 103,152.17 Da | 35.27 | 102.12 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 657 | 925 | 2.36082E-85 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 170 | 192 | 0.078 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 194 | 216 | 0.29 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 654 | 920 | 3.1E-44 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 75 | 6.6E-8 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 264 | 279 | 0.27 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 315 | 333 | 1.6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 367 | 444 | 7.48E-12 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 348 | 2.21E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 631 | 922 | 9.71E-74 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 131 | 474 | 2.1E-80 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 130 | 2.1E-7 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 727 | 928 | 1.7E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 613 | 726 | 3.2E-26 | - |
| SMART | SM00369 | LRR_typ_2 | 313 | 337 | 7.8 | IPR003591 |
| SMART | SM00220 | serkin_6 | 651 | 928 | 8.3E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 192 | 216 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 265 | 289 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 144 | 167 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 168 | 191 | 11.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 651 | 925 | 38.831059 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 657 | 679 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 771 | 783 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 550 | 571 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 550 | 565 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G69270.1 | receptor-like protein kinase 1. RPK1 is a leucine-rich receptor-like kinase located in the plasma membrane which is upregulated by abscisic acid, dehydration, high salt, low temperature, but not by other plant hormones. RPK1 knock-out and antisense plants show an ABA-insensitive phenotype. RPK1 plays a role in ABA-controlled cell proliferation and is a regulator of the ABA signal transduction pathway. Overexpression of the LRR domain has a dominant negative effect on RPK1. | 0 |
| RefSeq | XP_021756718.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Chenopodium quinoa] | 0 |
| Q9ZRF9 | Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana OX=3702 GN=RPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KVN7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology