Basic Information
Locus ID:
GOSA_00025173
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig279 | 122721 | 130422 | - | GOSA_00025173 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.83 | 53,822.04 Da | 36.70 | 88.60 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 22 | 341 | 2.2E-84 | IPR000490 |
| Pfam | PF07983 | X8 domain | 359 | 429 | 4.2E-18 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 22 | 341 | 9.38E-87 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 352 | 451 | 3.2E-10 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 21 | 348 | 1.2E-115 | - |
| SMART | SM00768 | X8_cls | 358 | 443 | 3.1E-46 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 256 | 269 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66250.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021852270.1 | glucan endo-1,3-beta-glucosidase 2-like [Spinacia oleracea] | 0 |
| Q9C7U5 | Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66250 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9RIB5 | X8 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_063550 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology