Basic Information
Locus ID:
GOSA_00025104
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
exocyst complex component
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig201 | 357748 | 359727 | - | GOSA_00025104 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.98 | 74,288.06 Da | 44.33 | 89.36 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03081 | Exo70 exocyst complex subunit | 277 | 642 | 4.4E-120 | IPR004140 |
| SUPERFAMILY | SSF74788 | Cullin repeat-like | 86 | 645 | 5.75E-154 | IPR016159 |
| Gene3D | G3DSA:1.20.1280.170 | Exocyst complex component Exo70 | 85 | 652 | 3.4E-180 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 76 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50380.1 | exocyst subunit exo70 family protein F1. A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. | 0 |
| RefSeq | XP_021759415.1 | exocyst complex component EXO70B1-like [Chenopodium quinoa] | 0 |
| Q9FGH9 | Exocyst complex component EXO70B1 OS=Arabidopsis thaliana OX=3702 GN=EXO70B1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QL96 | Exocyst subunit Exo70 family protein OS=Spinacia oleracea OX=3562 GN=SOVF_166560 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg18458, jg25620 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_19835 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah001863 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_5g110310 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg31716, Sbi_jg57587 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg25267 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00025104 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl54188, Sgl59498 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000006010, gene:ENSEOMG00000023108 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.5AG0016690, CQ.Regalona.r1.5BG0017960 |
| Apiaceae | Apium graveolens | 1 | Ag6G00246 |
| Arecaceae | Cocos nucifera | 5 | COCNU_02G014410, COCNU_02G014420, COCNU_11G003100 ... |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103701550, gene-LOC103707870 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.1446.V1.1, AsparagusV1_10.494.V1.1 |
| Asteraceae | Flaveria trinervia | 5 | Ftri16G21062, Ftri18G09850, Ftri18G24674, Ftri18G25381 ... |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G50380.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10012863m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp6g12530.v2.2, SpUn0015_0110.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g027600.2N |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno04g02540, gene.Cymno05g02560 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate09g08850 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-11502 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG10.1071 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00033630 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb5G27252 |
| Poaceae | Echinochloa crus-galli | 8 | AH02.4339, AH07.1871, AH09.785, BH02.4374, BH07.1859 ... |
| Poaceae | Eleusine coracana subsp. coracana | 6 | gene-QOZ80_1AG0044700, gene-QOZ80_1BG0094700 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.2HG0161700.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_022656, gene-QYE76_043556, gene-QYE76_057470 |
| Poaceae | Oryza coarctata | 5 | Oco01G028620, Oco02G029720, Oco03G010650, Oco04G011020 ... |
| Poaceae | Oryza sativa | 4 | LOC_Os01g69230.1, LOC_Os02g30230.2, LOC_Os03g24420.1 ... |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_03G384300, gene-BS78_04G140400 ... |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0303043, Pt_Chr0503365, Pt_Chr0600549 |
| Poaceae | Sporobolus alterniflorus | 12 | Chr02G002420, Chr03G022970, Chr05G032040, Chr08G019100 ... |
| Poaceae | Thinopyrum elongatum | 3 | Tel2E01G504100, Tel3E01G683100, Tel7E01G250200 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC2AG040750, gene_TRIDC2BG043720 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS2A02G281600.1.cds1, TraesCS2B02G298900.1.cds1 ... |
| Poaceae | Zea mays | 4 | Zm00001eb143180_P001, Zm00001eb241620_P001 ... |
| Poaceae | Zoysia japonica | 4 | nbis-gene-10978, nbis-gene-18995, nbis-gene-44917 ... |
| Poaceae | Zoysia macrostachya | 4 | Zma_g16347, Zma_g19552, Zma_g21147, Zma_g9276 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG01.2802, evm.TU.LG01.2803 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g05610 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_11_RagTag.1128, evm.TU.Scaffold_4_RagTag.363 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-12322, nbisL1-mrna-29008 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-11599, nbisL1-mrna-18712 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-12705, nbisL1-mrna-1948 |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000008l.77, add.evm.TU.utg000010l.74 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00008846 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-17018, nbisL1-mrna-22666 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-8781 |
| Salicaceae | Populus euphratica | 2 | populus_peu28840, populus_peu30252 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132632519 |
| Solanaceae | Solanum chilense | 1 | SOLCI007401400 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107014693 |
| Tamaricaceae | Reaumuria soongarica | 2 | gene_10372, gene_16023 |
| Tamaricaceae | Tamarix chinensis | 2 | TC08G2624, TC09G0847 |
| Zosteraceae | Zostera marina | 2 | Zosma01g33890.v3.1, Zosma03g15790.v3.1 |