Basic Information
Locus ID:
GOSA_00024729
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
transposon protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig1 | 165212 | 167344 | + | GOSA_00024729 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 39,000.44 Da | 28.53 | 76.11 | -0.41 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048500610.1 | uncharacterized protein LOC104893377 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A803N475 | Transposase, Ptta/En/Spm, plant OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah007497 |
| Amaranthaceae | Beta vulgaris | 5 | BVRB_6g135340, BVRB_7g164200, BVRB_7g165950, BVRB_9g208240 ... |
| Amaranthaceae | Suaeda aralocaspica | 12 | GOSA_00014580, GOSA_00014581, GOSA_00016668, GOSA_00017776 ... |
| Amaranthaceae | Suaeda glauca | 24 | Sgl03145, Sgl03950, Sgl08246, Sgl09020, Sgl09021, Sgl10179 ... |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000002377, gene:ENSEOMG00000011354 ... |
| Amaranthaceae | Chenopodium quinoa | 5 | CQ.Regalona.r1.2BG0010590, CQ.Regalona.r1.2BG0014070 ... |