Basic Information
Locus ID:
GOSA_00024397
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
60s ribosomal protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig488 | 507789 | 524943 | + | GOSA_00024397 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.36 | 48,523.11 Da | 40.43 | 77.61 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17135 | Ribosomal protein 60S L18 and 50S L18e | 198 | 258 | 4.8E-30 | IPR021131 |
| SUPERFAMILY | SSF52080 | Ribosomal proteins L15p and L18e | 194 | 258 | 9.42E-14 | IPR036227 |
| Gene3D | G3DSA:3.100.10.10 | - | 197 | 276 | 4.9E-28 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 378 | 392 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 378 | 411 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 81 | - | - |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27850.1 | Ribosomal protein L18e/L15 superfamily protein. | 0 |
| RefSeq | XP_010684349.1 | 60S ribosomal protein L18-2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q940B0 | Large ribosomal subunit protein eL18x OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1 | 0 | |
| TrEMBL | A0A803L9Z6 | Ribosomal_L18e/L15P domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology