Basic Information
Locus ID:
GOSA_00024376
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig488 | 24286 | 37189 | + | GOSA_00024376 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 89,198.12 Da | 47.98 | 88.13 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 131 | 184 | 1.6E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 70 | 2.8E-4 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 544 | 814 | 1.9E-42 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 517 | 814 | 1.37E-69 | IPR011009 |
| SUPERFAMILY | SSF101447 | Formin homology 2 domain (FH2 domain) | 482 | 492 | 8.89E-6 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 241 | 1.02E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 254 | 4.3E-43 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 504 | 617 | 3.3E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 618 | 829 | 3.4E-52 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 540 | 818 | 34.98661 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 349 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 458 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 0 |
| RefSeq | XP_021715740.1 | protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X2 [Chenopodium quinoa] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R4S6 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_107010 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology