Basic Information
Locus ID:
GOSA_00023813
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig459 | 390388 | 391974 | + | GOSA_00023813 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.15 | 24,397.84 Da | 26.82 | 99.17 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 175 | 210 | 3.3E-8 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 95 | 149 | 7.6E-8 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 88 | 210 | 5.98E-25 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 169 | 214 | 7.4E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 39 | 147 | 4.6E-25 | - |
| SMART | SM00219 | tyrkin_6 | 84 | 215 | 0.0026 | IPR020635 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65800.1 | receptor kinase 2. encodes a putative receptor-like serine/threonine protein kinases that is similar to brassica self-incompatibility (S) locus. expressed in specifically in cotyledons, leaves, and sepals, in correlation with the maturation of these structures. | 0 |
| RefSeq | XP_028065596.1 | G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 isoform X2 [Camellia sinensis] | 0 |
| Q9S972 | Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis thaliana OX=3702 GN=SD16 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X8Z6L7 | Uncharacterized protein OS=Salvia splendens OX=180675 GN=SASPL_144593 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg1588 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00023813 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl25444, Sgl25455 |
| Apiaceae | Apium graveolens | 1 | Ag8G01866 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132629060 |