Basic Information
Locus ID:
GOSA_00023611
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig161 | 914154 | 921819 | - | GOSA_00023611 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.99 | 83,564.29 Da | 42.34 | 77.97 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 94 | 290 | 3.91483E-103 | - |
| Pfam | PF00183 | Hsp90 protein | 402 | 707 | 1.2E-111 | IPR001404 |
| Pfam | PF00183 | Hsp90 protein | 272 | 319 | 6.4E-10 | IPR001404 |
| Pfam | PF00183 | Hsp90 protein | 322 | 400 | 4.8E-24 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 108 | 267 | 2.4E-13 | IPR003594 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 322 | 544 | 6.22E-64 | IPR020568 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 85 | 300 | 2.23E-63 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 566 | 688 | 9.68E-34 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 321 | 402 | 8.3E-24 | - |
| Gene3D | G3DSA:3.40.50.11260 | - | 457 | 543 | 1.2E-32 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 71 | 314 | 2.5E-91 | IPR036890 |
| Gene3D | G3DSA:1.20.120.790 | - | 544 | 691 | 1.3E-52 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 403 | 456 | 4.4E-17 | - |
| SMART | SM00387 | HKATPase_4 | 107 | 269 | 4.5E-7 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 399 | 730 | 3.0E-85 | IPR001404 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 48 | 403 | 8.5E-120 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 105 | 114 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 173 | 190 | 1.6E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 85 | 105 | 1.6E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 202 | 224 | 1.6E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 106 | 128 | 1.6E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 155 | 172 | 1.6E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 276 | 294 | 1.6E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 257 | 274 | 1.6E-63 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 82 | 688 | 22.465271 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 696 | 739 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 326 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 703 | 723 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_021756076.1 | heat shock protein 90-5, chloroplastic-like [Chenopodium quinoa] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L7L2 | HATPase_c domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology