Basic Information
Locus ID:
GOSA_00022870
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig275 | 468766 | 473699 | + | GOSA_00022870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 111,548.85 Da | 32.58 | 106.06 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 480 | 522 | 1.8E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 103 | 162 | 3.2E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 535 | 594 | 2.7E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 271 | 330 | 1.1E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 75 | 2.2E-9 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 714 | 986 | 4.3E-47 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 61 | 312 | 2.48E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 706 | 989 | 7.65E-70 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 251 | 596 | 9.42E-72 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 191 | 282 | 1.8E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 712 | 797 | 3.2E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 283 | 383 | 2.5E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 190 | 4.3E-40 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 798 | 1012 | 3.9E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 384 | 627 | 2.8E-65 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 509 | 532 | 390.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 437 | 461 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 341 | 365 | 13.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 712 | 989 | 1.3E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 101 | 124 | 390.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 125 | 148 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 197 | 221 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 485 | 508 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 269 | 292 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 557 | 581 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 293 | 317 | 16.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 712 | 1015 | 38.265697 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 718 | 742 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 840 | 852 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 512 | 525 | 6.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 557 | 570 | 6.5E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_021763318.1 | MDIS1-interacting receptor like kinase 1-like [Chenopodium quinoa] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LAB2 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology