Basic Information
Locus ID:
GOSA_00020746
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig509 | 1090761 | 1098247 | + | GOSA_00020746 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 32,130.45 Da | 36.15 | 106.77 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 46 | 231 | 4.5E-54 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 14 | 230 | 4.11E-22 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 44 | 289 | 2.5E-62 | IPR027417 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 165 | 236 | 16.734076 | IPR020587 |
| PRINTS | PR00142 | RecA protein signature | 125 | 154 | 5.0E-56 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 174 | 202 | 5.0E-56 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 53 | 82 | 5.0E-56 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 87 | 116 | 5.0E-56 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 260 | 277 | 5.0E-56 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 207 | 236 | 5.0E-56 | IPR013765 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_021724208.1 | DNA repair protein recA homolog 2, mitochondrial-like [Chenopodium quinoa] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MAJ9 | RECA_2 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology