Basic Information
Locus ID:
GOSA_00020352
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig147 | 82130 | 86741 | + | GOSA_00020352 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 103,777.71 Da | 34.56 | 91.79 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 606 | 879 | 4.43946E-96 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 73 | 1.2E-6 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 338 | 375 | 3.1E-4 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 119 | 158 | 1.7E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 601 | 874 | 2.0E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 577 | 887 | 1.23E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 40 | 316 | 2.27E-45 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 340 | 448 | 1.09E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 678 | 890 | 6.6E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 336 | 2.5E-79 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 562 | 677 | 9.3E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 338 | 462 | 1.1E-35 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 293 | 315 | 390.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 246 | 268 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 146 | 171 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 400 | 424 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 122 | 145 | 8.0E-4 | IPR003591 |
| SMART | SM00220 | serkin_6 | 600 | 880 | 3.9E-44 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 600 | 880 | 40.823952 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 725 | 737 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 606 | 628 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 455 | 487 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_010690479.2 | receptor protein kinase TMK1 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RDC0 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_084070 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology