Basic Information
Locus ID:
GOSA_00020229
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig18 | 374984 | 379476 | - | GOSA_00020229 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 114,737.23 Da | 30.47 | 100.64 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 734 | 1003 | 1.4E-48 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 45 | 94 | 2.8E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 292 | 351 | 2.6E-6 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 97 | 332 | 2.51E-47 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 734 | 1006 | 2.7E-71 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 279 | 620 | 1.33E-62 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 213 | 357 | 6.1E-38 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 810 | 1029 | 3.4E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 358 | 650 | 1.4E-78 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 45 | 212 | 1.1E-37 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 717 | 809 | 2.6E-20 | - |
| SMART | SM00369 | LRR_typ_2 | 362 | 386 | 89.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 731 | 1003 | 6.3E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 217 | 241 | 77.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 290 | 313 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 483 | 506 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 145 | 169 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 577 | 600 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 458 | 482 | 260.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 731 | 1018 | 38.392902 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 737 | 760 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 857 | 869 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021752360.1 | leucine-rich repeat receptor-like protein kinase TDR [Chenopodium quinoa] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KT63 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology